## Arguments

- wd
The working directory containing the NP_RFxxxx.TXT or IT_RFxxxx.TXT file

- rdata
The processed output of an IT2B or NPAG run, depending on local or server runs.

- icen
Median (default), mean or mode of Bayesian posterior to be used to calculate predictions.

- type
“NPAG” (default) or “IT2B” report type

- parallel
Boolean parameter which indicates the type of run done. Default is

`FALSE`

for serial.

## Value

Several files are placed in the `wd`

- NPAGreport.html or IT2Breport.html
An .html file containing a summary of all the results

- poppoints.csv
NPAG only: A .csv file containing the population support points and probabilities

- poparam.csv
A .csv file containing a summary of the population parameter values, including mean, standard deviation, coefficient of variation, variance, and median

- popcor.csv
A .csv file containing the population parameter correlation matrix

- popcov.csv
A .csv file containing the population parameter covariance matrix

- cycle.pdf
A .pdf file containing the run cycle information (see

`plot.PMcycle`

)- cycle.png
A thumbnail of the run cycle information for the .html file

- final.pdf
A .pdf file containing the population final cycle information (see

`plot.PMfinal`

)- final.png
A thumbnail of the population final cycle information for the .html file

- opx.pdf
One or more .pdf files, where

*x*is the number of the output equation, each containing two observed vs. predicted plots: population and individual Bayesian posterior predictions (see`plot.PMop`

)- opx.png
One or more thumnails of the observed vs. predicted plots for the .html file

- NPAGout.Rdata or IT2Bout.Rdata
An R data file containing the output of

`NPparse`

or`ITparse`

,`makeFinal`

,`makeCycle`

,`makeOP`

,`makeCov`

,`makePop`

,`makePost`

, and the data file for the run read by`PMreadMatrix`

. This file can be loaded using`PMload`

.